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Table 1 Classification and general features of M. rhizophilum CL-YJ9T [8, 9]

From: Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [39]

  

Phylum Proteobacteria

TAS [40]

  

Class Gammaproteobacteria

TAS [41]

  

Order Alteromonadales

TAS [42]

  

Family Alteromonadaceae

TAS [43]

  

Genus Marinobacterium

TAS [1]

  

Species Marinobacterium rhizophilum

TAS [4]

  

Type strain CL-YJ9T

TAS [4]

 

Gram stain

Negative

TAS [4]

 

Cell shape

Straight rods

TAS [4]

 

Motility

Motile

TAS [4]

 

Sporulation

Not reported

NAS

 

Temperature range

5-30 °C

TAS [4]

 

Optimum temperature

25 °C

TAS [4]

 

pH range; Optimum

6.0-9.0; 7.0

TAS [4]

 

Carbon source

Glucose, sucrose, mannose, glycerol, glycine, mannitol

TAS [4]

MIGS-6

Habitat

Sediment closely associated with the roots of a plant (Suaeda japonica)

TAS [4]

MIGS-6.3

Salinity

1-5% (optimum: 3%)

TAS [4]

MIGS-22

Oxygen requirement

Strictly aerobic

TAS [4]

MIGS-15

Biotic relationship

Microbiota of the rhizome of Suaeda japonica

TAS [4]

MIGS-14

Pathogenicity

Non-pathogenic

NAS

MIGS-4

Geographic location

Youngjong Island, Korea

TAS [4]

MIGS-5

Sample collection

November, 2005

TAS [4]

MIGS-4.1

Latitude

37.485o N

TAS [4]

MIGS-4.2

Longitude

126.516o E

TAS [4]

MIGS-4.3

Depth

Not reported

NAS

MIGS-4.4

Altitude

Not reported

NAS

  1. aEvidence codes - IDA inferred from direct assay, TAS traceable author statement (i.e., a direct report exists in the literature), NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [44]