Table 4 Number of genes associated with general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 199 | 2.52 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 732 | 9.26 | Transcription |
L | 213 | 2.69 | Replication, recombination and repair |
B | 1 | 0.01 | Chromatin structure and dynamics |
D | 55 | 0.70 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 128 | 1.62 | Defense mechanisms |
T | 694 | 8.77 | Signal transduction mechanisms |
M | 328 | 4.15 | Cell wall/membrane/envelope biogenesis |
N | 107 | 1.35 | Cell motility |
Z | 11 | 0.14 | Cytoskeleton |
U | 63 | 0.80 | Intracellular trafficking, secretion, and vesicular transport |
O | 146 | 1.85 | Posttranslational modification, protein turnover, chaperones |
C | 268 | 3.39 | Energy production and conversion |
G | 1023 | 12.93 | Carbohydrate transport and metabolism |
E | 432 | 5.46 | Amino acid transport and metabolism |
F | 121 | 1.53 | Nucleotide transport and metabolism |
H | 194 | 2.45 | Coenzyme transport and metabolism |
I | 149 | 1.88 | Lipid transport and metabolism |
P | 361 | 4.56 | Inorganic ion transport and metabolism |
Q | 134 | 1.69 | Secondary metabolites biosynthesis, transport and catabolism |
R | 777 | 9.82 | General function prediction only |
S | 496 | 6.27 | Function unknown |
– | 1277 | 16.15 | Not in COGs |