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Table 3 Genome statistics

From: High-quality-draft genomic sequence of Paenibacillus ferrarius CY1T with the potential to bioremediate Cd, Cr and Se contamination

Attribute

Value

% of totala

Genome size (bp)

9,184,169

100.00

DNA coding (bp)

7,828,640

85.24

DNA G + C (bp)

4,205,829

45.79

DNA scaffolds

73

100.00

Contigs

75

100.00

Total genesb

8260

 

RNA genes

81

 

Pseudo genes

209

 

Protein-coding genes

7909

100.00

Genes in internal clusters

648

8.19

Genes with function prediction

4231

53.50

Genes assigned to COGs

6632

83.85

Genes with Pfam domains

6363

80.45

Genes with signal peptides

765

9.67

Genes with transmembrane helices

2251

28.46

CRISPR repeats

24

0.30

  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
  2. bAlso includes 209 pseudogenes, 58 tRNA genes, 19 rRNAs and 4 ncRNA