Table 4 Number of genes associated with general COGs functional categories
Code | Value | % agea | Description |
|---|---|---|---|
J | 250 | 6.55 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.05 | RNA processing and modification |
K | 293 | 7.68 | Transcription |
L | 154 | 4.04 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 41 | 1.07 | Cell cycle control, cell division, chromosome partitioning |
V | 93 | 2.44 | Defense mechanisms |
T | 176 | 4.61 | Signal transduction mechanisms |
M | 271 | 7.11 | Cell wall/membrane/envelope biogenesis |
N | 156 | 4.09 | Cell motility |
U | 60 | 1.57 | Intracellular trafficking, secretion, and vesicular transport |
O | 153 | 4.01 | Post-translational modifications, protein turnover, chaperones |
C | 282 | 7.39 | Energy production and conversion |
G | 381 | 9.99 | Carbohydrate transport and metabolism |
E | 335 | 8.78 | Amino acid transport and metabolism |
F | 101 | 2.65 | Nucleotide transport and metabolism |
H | 169 | 4.43 | Coenzyme transport and metabolism |
I | 119 | 3.12 | Lipid transport and metabolism |
P | 190 | 4.98 | Inorganic ion transport and metabolism |
Q | 53 | 1.39 | Secondary metabolites biosynthesis, transport and catabolism |
R | 211 | 5.53 | General function prediction only |
S | 238 | 6.24 | Function unknown |
– | 750 | 7.43 | Not in COGs |