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Table 1 Classification and general features of E. coli BG1 [58]

From: Draft genome sequence and characterization of commensal Escherichia coli strain BG1 isolated from bovine gastro-intestinal tract

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [59]

  

Phylum Proteobacteria

TAS [60]

  

Class Gammaproteobacteria

TAS [61, 62]

  

Order “Enterobacteriales”

TAS [63]

  

Family Enterobacteriaceae

TAS [64, 65]

  

Genus Escherichia

TAS [66, 67]

  

Species Escherichia coli

TAS [66, 67]

 

Gram stain

Negative

IDA, TAS [1]

 

Cell shape

Rod

IDA, TAS [1]

 

Motility

Motile

TAS [1]

 

Sporulation

None

TAS [1]

 

Temperature range

≈ 15–48 °C

TAS [1]

 

Optimum temperature

37–42 °C

TAS [1]

 

pH range; Optimum

5.5–8.0; 7

TAS [1]

 

Carbon source

Carbohydrates, amino acids

IDA, TAS [1]

MIGS-6

Habitat

Bovine digestive tract

IDA

MIGS-6.3

Salinity

Not reported

 

MIGS-22

Oxygen requirement

Facultative anaerobe

TAS [1]

MIGS-15

Biotic relationship

Commensalism

IDA

MIGS-14

Pathogenicity

Non-pathogenic

 

MIGS-4

Geographic location

France

 

MIGS-5

Sample collection

January 14, 2009

 

MIGS-4.1

Latitude

Not reported

 

MIGS-4.2

Longitude

Not reported

 

MIGS-4.4

Altitude

Not reported

 
  1. aEvidence codes – IDA Inferred from Direct Assay; TAS Traceable Author Statement (i.e., a direct report exists in the literature); NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [68]