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Table 2 Percentage of in silico DNA-DNA hybridization (DDH)a and average nucleotide identities (ANI)b among the selected Elizabethkingia genomes

From: Insights from the draft genome into the pathogenicity of a clinical isolate of Elizabethkingia meningoseptica Em3

 

E. meningoseptica EM3

E. anophelis

R26T [43]

E. meningoseptica

ATCC 13253T [44]

E. miricola

BM10T [45]

E. endophytica

JM-87T [46]

E. meningoseptica EM3

 

31.90

80.15

91.10

98.52

31.20

80.44

32.70

80.25

E. anophelis R26T

31.90

80.15

 

33.60

80.26

68.80

91.52

78.60

97.49

E. meningoseptica ATCC 13253T

91.10

98.52

33.60

80.26

 

31.40

80.26

33.30

80.41

E. miricola BM10T

31.20

80.44

68.80

91.52

31.40

80.26

 

68.70

91.41

E. endophytica JM-87T

32.70

80.25

78.60

97.49

33.30

80.41

68.70

91.41

 
  1. Nucleotide sequences were downloaded from GenBank. The accession numbers for E. anophelis R26T, E. meningoseptica ATCC 13253T, E. miricola BM10T and E. endophytica JM-87T are NZ_ANIW01000001.1, NZ_ASAN01000001.1, NZ_CP011059.1 and NZ_CP016372, respectively
  2. aIn silico DNA-DNA hybridization was calculated by using Genome-to-Genome Distance Calculator (GGDC) [47]. The percentage of DDH was shown on the top and bolded
  3. bANI values were computed for pairwise genome comparison with using the OrthoANIu algorithm [48]. The percentage of ANI was shown on the bottom