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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile

Code Value % of total Description
J 175 7.89 Translation, ribosomal structure and biogenesis
A not reported not reported RNA processing and modification
K 134 6.04 Transcription
L 83 3.74 Replication, recombination and repair
B 1 0.05 Chromatin structure and dynamics
D 45 2.03 Cell cycle control, cell division, chromosome partitioning
V 58 2.62 Defense mechanisms
T 131 5.91 Signal transduction mechanisms
M 124 5.59 Cell wall/membrane biogenesis
N 52 2.35 Cell motility
U 34 1.53 Intracellular trafficking and secretion
O 90 4.06 Posttranslational modification, protein turnover, chaperones
C 178 8.03 Energy production and conversion
G 81 3.65 Carbohydrate transport and metabolism
E 227 10.24 Amino acid transport and metabolism
F 69 3.11 Nucleotide transport and metabolism
H 149 6.72 Coenzyme transport and metabolism
I 80 3.61 Lipid transport and metabolism
P 133 6.00 Inorganic ion transport and metabolism
Q 24 1.08 Secondary metabolites biosynthesis, transport and catabolism
R 183 8.25 General function prediction only
S 129 5.82 Function unknown
1242 38.66 Not in COGs
  1. The total is based on the number of protein coding genes in the genome