Table 4 Number of genes associated with general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 175 | 7.89 | Translation, ribosomal structure and biogenesis |
A | not reported | not reported | RNA processing and modification |
K | 134 | 6.04 | Transcription |
L | 83 | 3.74 | Replication, recombination and repair |
B | 1 | 0.05 | Chromatin structure and dynamics |
D | 45 | 2.03 | Cell cycle control, cell division, chromosome partitioning |
V | 58 | 2.62 | Defense mechanisms |
T | 131 | 5.91 | Signal transduction mechanisms |
M | 124 | 5.59 | Cell wall/membrane biogenesis |
N | 52 | 2.35 | Cell motility |
U | 34 | 1.53 | Intracellular trafficking and secretion |
O | 90 | 4.06 | Posttranslational modification, protein turnover, chaperones |
C | 178 | 8.03 | Energy production and conversion |
G | 81 | 3.65 | Carbohydrate transport and metabolism |
E | 227 | 10.24 | Amino acid transport and metabolism |
F | 69 | 3.11 | Nucleotide transport and metabolism |
H | 149 | 6.72 | Coenzyme transport and metabolism |
I | 80 | 3.61 | Lipid transport and metabolism |
P | 133 | 6.00 | Inorganic ion transport and metabolism |
Q | 24 | 1.08 | Secondary metabolites biosynthesis, transport and catabolism |
R | 183 | 8.25 | General function prediction only |
S | 129 | 5.82 | Function unknown |
– | 1242 | 38.66 | Not in COGs |