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Table 3 Nucleotide content and gene count levels of the genome

From: Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile

Attribute

Value

% of total

Genome size (bp)

3,116,746

100

DNA coding (bp)

2,773,015

88.97

DNA G + C (bp)

1,510,353

48.46

DNA scaffolds

34

100

Total genes

3213

100

Protein coding genes

3163

98.44

RNA genes

50

1.56

Pseudo genes

0

0

Genes in internal clusters

177

not reported

Genes with function prediction

2223

69.19

Genes assigned to COGs

1971

61.34

Genes with Pfam domains

2632

81.92

Genes with signal peptides

170

5.29

Genes with trans-membrane helices

962

29.94

CRISPR repeats

0

0