Table 4 Number of genes associated with general COG functional categories
From: Draft genome sequence of the cellulolytic endophyte Chitinophaga costaii A37T2T
Code | Value | %age | Description |
|---|---|---|---|
J | 186 | 7.42 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 215 | 8.58 | Transcription |
L | 90 | 3.50 | Replication, recombination and repair |
D | 19 | 0.76 | Cell cycle control, Cell division, chromosome partitioning |
V | 98 | 3.91 | Defense mechanisms |
T | 114 | 4.55 | Signal transduction mechanisms |
M | 211 | 8.42 | Cell wall/membrane biogenesis |
N | 12 | 0.48 | Cell motility |
U | 20 | 0.80 | Intracellular trafficking and secretion |
O | 136 | 5.42 | Posttranslational modification, protein turnover, chaperones |
C | 126 | 5.03 | Energy production and conversion |
G | 165 | 6.58 | Carbohydrate transport and metabolism |
E | 196 | 7.82 | Amino acid transport and metabolism |
F | 69 | 2.75 | Nucleotide transport and metabolism |
H | 141 | 5.62 | Coenzyme transport and metabolism |
I | 125 | 4.99 | Lipid transport and metabolism |
P | 150 | 5.98 | Inorganic ion transport and metabolism |
Q | 70 | 2.79 | Secondary metabolites biosynthesis, transport and catabolism |
R | 248 | 9.89 | General function prediction only |
S | 104 | 4.15 | Function unknown |
- | 1990 | 46.56 | Not in COGs |