Permanent draft genome sequence of Frankia sp. NRRL B-16219 reveals the presence of canonical nod genes, which are highly homologous to those detected in Candidatus Frankia Dg1 genome

Table 3 Genome statistics

Attribute	Value	% of Total^a
Genome size (bp)	8,032,739	100.0
DNA coding (bp)	6,603,166	82.20
DNA G + C (bp)	5,760,840	71.72
DNA Contigs289100		.0
Total genes	6859	100.0
Protein coding genes	6, 211	91.01
RNA genes	53	0.77
Pseudo genes^b	561	8.18
Genes in internal clusters	-	-
Genes with function prediction	5046	73.60
Genes assigned to COGs	3609	52.64
Genes with Pfam domains	4735	69.06
Genes with signal peptides	176	2.57
Genes with transmembrane helices	296	4.32
CRISPR repeats	2	-

^aThe total is based on either the size of the genome in base pairs or the total genes in the annotated genome
^bPseudo genes may also be counted as protein coding or RNA genes, so is not additive under total gene count

ISSN: 2524-6372