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Table 1 Classification and general features of Frankia sp. strain NRRL B-16219 according to MIGS [45]

From: Permanent draft genome sequence of Frankia sp. NRRL B-16219 reveals the presence of canonical nod genes, which are highly homologous to those detected in Candidatus Frankia Dg1 genome

MIGS ID Property Term Evidence codea
  Classification Domain Bacteria TAS [46]
   Phylum Actinobacteria TAS [47]
   Class Actinobacteria TAS [48]
   Order Frankiales TAS [49]
   Family Frankiaceae TAS [50, 51]
   Genus Frankia TAS [52, 53]
   Species Frankia sp. IDR
   Strain NRRL B-16219IDA  
  Gram stain Positive IDA
  Cell shape Filament-shaped IDA
  Motility Non-motile NAS
  Sporulation Sporulating NAS
  Temperature range 25–35 °C TAS [5]
  Optimum temperature 28 °C TAS [5]
  pH range; Optimum pH 6.3 – pH 6.8 NAS
  Carbon source short fatty acids, TCA-cycle intermediates and carbohydrates IDA
MIGS-6 Habitat Soil and Host-associated IDA
MIGS-6.3 Salinity Not reported  
MIGS-22 Oxygen requirement Aerobic NAS
MIGS-15 Biotic relationship Free-living and Host plant-associated NAS
MIGS-14 Pathogenicity Non-pathogen NAS
MIGS-4 Geographic location Soil beneath Ceanothus jepsonii, USA IDA
MIGS-5 Sample collection 1982 IDA
MIGS-4.1 Latitude Not reported -
MIGS-4.2 Longitude Not reported -
MIGS-4.4 Altitude Not reported -
  1. a Evidence codes – IDA INFERRED FROM DIRECT ASSAY, TAS traceable author statement (i.e., a direct report exists in the literature) NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence)