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Table 1 Classification and general features of Frankia sp. strain NRRL B-16219 according to MIGS [45]

From: Permanent draft genome sequence of Frankia sp. NRRL B-16219 reveals the presence of canonical nod genes, which are highly homologous to those detected in Candidatus Frankia Dg1 genome

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [46]

  

Phylum Actinobacteria

TAS [47]

  

Class Actinobacteria

TAS [48]

  

Order Frankiales

TAS [49]

  

Family Frankiaceae

TAS [50, 51]

  

Genus Frankia

TAS [52, 53]

  

Species Frankia sp.

IDR

  

Strain NRRL B-16219IDA

 
 

Gram stain

Positive

IDA

 

Cell shape

Filament-shaped

IDA

 

Motility

Non-motile

NAS

 

Sporulation

Sporulating

NAS

 

Temperature range

25–35 °C

TAS [5]

 

Optimum temperature

28 °C

TAS [5]

 

pH range; Optimum

pH 6.3 – pH 6.8

NAS

 

Carbon source

short fatty acids, TCA-cycle intermediates and carbohydrates

IDA

MIGS-6

Habitat

Soil and Host-associated

IDA

MIGS-6.3

Salinity

Not reported

 

MIGS-22

Oxygen requirement

Aerobic

NAS

MIGS-15

Biotic relationship

Free-living and Host plant-associated

NAS

MIGS-14

Pathogenicity

Non-pathogen

NAS

MIGS-4

Geographic location

Soil beneath Ceanothus jepsonii, USA

IDA

MIGS-5

Sample collection

1982

IDA

MIGS-4.1

Latitude

Not reported

-

MIGS-4.2

Longitude

Not reported

-

MIGS-4.4

Altitude

Not reported

-

  1. a Evidence codes – IDA INFERRED FROM DIRECT ASSAY, TAS traceable author statement (i.e., a direct report exists in the literature) NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence)