Table 4 Genome statistics
From: High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,019,382 | 100.00% |
DNA coding (bp) | 3,614,725 | 89.93% |
DNA G + C (bp) | 2,803,041 | 69.74% |
DNA scaffolds | 6 | |
Total genes | 3894 | 100.00% |
Protein coding genes | 3827 | 98.28% |
RNA genes | 67 | 1.72% |
Pseudo genes | 45 | 1.16% |
Genes in internal clusters | 982 | 25.66% |
Genes with function prediction | 2831 | 72.7% |
Genes assigned to COGs | 2747 | 71.77% |
Genes with Pfam domains | 2964 | 76.12% |
Genes with signal peptides | 458 | 11.97% |
Genes with transmembrane helices | 779 | 20.36% |
CRISPR repeats | 0 | 0.00% |