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Table 4 Number of protein coding genes of N. dokdonensis FR1436 associated with the general COG functional categories

From: Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T

Code Value Percentage* Description
J 151 3.68 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 212 5.17 Transcription
L 164 4.00 Replication, recombination, and repair
B 1 0.02 Chromatin structure and dynamics
D 25 0.61 Cell cycle control, cell division and chromosome partitioning
V 41 1.00 Defense mechanisms
T 116 2.83 Signal transduction mechanisms
M 124 3.02 Cell wall/membrane/envelope biogenesis
N 3 0.07 Cell motility
U 29 0.71 Intracellular trafficking, and secretion
O 111 2.70 Posttranslational modification, protein turnover, chaperones
C 240 5.85 Energy production and conversion
G 145 3.53 Carbohydrate transport and metabolism
E 317 7.72 Amino acid transport and metabolism
F 75 1.83 Nucleotide transport and metabolism
H 106 2.58 Coenzyme metabolism
I 232 5.65 Lipid metabolism
P 133 3.24 Inorganic ion transport and metabolism
Q 86 2.10 Secondary metabolites biosynthesis, transport, and catabolism
R 321 7.82 General function prediction only
S 199 4.85 Function unknown
- 1272 30.99 Not in COGs
  1. *The percentages are based on the total number of protein-coding genes in the genome