Table 3 Genome statistics
From: Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 4,376,707 | 100 |
DNA coding (bp) | 4,059,326 | 92.75 |
DNA G + C (bp) | 3,162,427 | 72.26 |
DNA scaffolds | 1 | |
Total genes | 4165 | 100 |
Protein coding genes | 4104 | 98.54 |
RNA genes | 61 | 1.46 |
Pseudogenes | 0 | 0 |
Genes in internal clusters | ND* | ND* |
Genes with function prediction | 2973 | 71.38 |
Genes assigned to COGs | 2832 | 69.01 |
Genes with Pfam domains | 2584 | 62.04 |
Genes with signal peptides | 343 | 8.24 |
Genes with transmembrane helices | 1011 | 24.27 |
CRISPR repeats | 10 | 10 |