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Table 4 Number of genes associated with general COG functional categories

From: Insights into Cedecea neteri strain M006 through complete genome sequence, a rare bacterium from aquatic environment

Code Value % agea Description
J 189 4.70 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 395 9.82 Transcription
L 133 3.31 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 32 0.80 Cell cycle control, Cell division, chromosome partitioning
V 47 1.17 Defense mechanisms
T 181 4.50 Signal transduction mechanisms
M 224 5.57 Cell wall/membrane biogenesis
N 117 2.91 Cell motility
U 105 2.61 Intracellular trafficking and secretion
O 145 3.60 Posttranslational modification, protein turnover, chaperones
C 231 5.74 Energy production and conversion
G 362 9.00 Carbohydrate transport and metabolism
E 412 10.24 Amino acid transport and metabolism
F 96 2.39 Nucleotide transport and metabolism
H 158 3.93 Coenzyme transport and metabolism
I 109 2.71 Lipid transport and metabolism
P 266 6.61 Inorganic ion transport and metabolism
Q 75 1.86 Secondary metabolites biosynthesis, transport and catabolism
R 409 10.16 General function prediction only
S 337 8.37 Function unknown
- 939 20.64 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the annotated genome