Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 36,172,237 | 100.0 |
DNA coding (bp) | 17,676,693 | 48.87 |
DNA G + C (bp) | 17,905,257 | 49.50 |
DNA scaffolds | 310 | |
Total genes | 10,973 | 100.0 |
Protein coding genes | 10,804 | 98.45 |
RNA genes | 169 | 1.56 |
Pseudo genes | Unknown | |
Genes in internal clusters | Unknown | |
Genes with function prediction (GO annotated proteins) | 10,761 | 98.06 |
Genes assigned to COGs | 7509 | 69.50 |
Genes with Pfam domains | 8430 | 76.82 |
Genes with signal peptides | 994 | 9.05 |
Genes with transmembrane helices | 2362 | 21.86 |
CRISPR repeats | N/A |