Table 5 Number of genes associated with general COG functional categories
From: The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1
Code | Value | % age | Description |
|---|---|---|---|
J | 349 | 8.51 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 348 | 8.48 | Transcription |
L | 208 | 5.017 | Replication, recombination and repair |
B | 3 | 0.07 | Chromatin structure and dynamics |
D | 129 | 3.14 | Cell cycle control, Cell division, chromosome partitioning |
V | 168 | 4.10 | Defense mechanisms |
T | 344 | 8.39 | Signal transduction mechanisms |
M | 425 | 10.36 | Cell wall/membrane biogenesis |
N | 241 | 5.88 | Cell motility |
U | 198 | 4.83 | Intracellular trafficking and secretion |
O | 295 | 7.19 | Posttranslational modification, protein turnover, chaperones |
C | 369 | 9.00 | Energy production and conversion |
G | 366 | 8.92 | Carbohydrate transport and metabolism |
E | 479 | 11.68 | Amino acid transport and metabolism |
F | 129 | 3.14 | Nucleotide transport and metabolism |
H | 397 | 9.68 | Coenzyme transport and metabolism |
I | 266 | 6.48 | Lipid transport and metabolism |
P | 358 | 8.72 | Inorganic ion transport and metabolism |
Q | 243 | 5.92 | Secondary metabolites biosynthesis, transport and catabolism |
R | 669 | 16.31 | General function prediction only |
S | 263 | 6.41 | Function unknown |
- | 874 | 21.31 | Not in COGs |