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Table 5 Number of genes associated with general COG functional categories

From: The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1

Code Value % age Description
J 349 8.51 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 348 8.48 Transcription
L 208 5.017 Replication, recombination and repair
B 3 0.07 Chromatin structure and dynamics
D 129 3.14 Cell cycle control, Cell division, chromosome partitioning
V 168 4.10 Defense mechanisms
T 344 8.39 Signal transduction mechanisms
M 425 10.36 Cell wall/membrane biogenesis
N 241 5.88 Cell motility
U 198 4.83 Intracellular trafficking and secretion
O 295 7.19 Posttranslational modification, protein turnover, chaperones
C 369 9.00 Energy production and conversion
G 366 8.92 Carbohydrate transport and metabolism
E 479 11.68 Amino acid transport and metabolism
F 129 3.14 Nucleotide transport and metabolism
H 397 9.68 Coenzyme transport and metabolism
I 266 6.48 Lipid transport and metabolism
P 358 8.72 Inorganic ion transport and metabolism
Q 243 5.92 Secondary metabolites biosynthesis, transport and catabolism
R 669 16.31 General function prediction only
S 263 6.41 Function unknown
- 874 21.31 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome