Table 4 Genome statistics
From: The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,123,946 | 100.00 |
DNA coding (bp) | 4,365,468 | 85.20 |
DNA GÂ +Â C (bp) | 3,313,791 | 64.67 |
DNA scaffolds | 4 | 100.00 |
Total genes | 4410 | 100.00 |
Protein coding genes | 4102 | 93.02 |
RNA genes | 95 | 2.15 |
Pseudo genes | 213 | 4.83 |
Genes in internal clusters | - | - |
Genes with function prediction | 3375 | 76.53 |
Genes assigned to COGs | 3228 | 73.20 |
Genes with Pfam domains | 3302 | 74.88 |
Genes with signal peptides | 553 | 12.54 |
Genes with transmembrane helices | 911 | 20.66 |
CRISPR repeats | 1 | - |