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Table 5 Genome statistics

From: First draft genome sequence of a strain from the genus Fusibacter isolated from Salar de Ascotán in Northern Chile

Attribute

Value

% of Total

Genome size (bp)a

5,111,250

100.0

DNA coding (bp)

4,450,431

87.1

DNA G + C (bp)

1,921,825

37.6

DNA scaffolds

57

100.0

Total genes

4780

100,0

Protein coding genes

4700

98,3

RNA genesb

80

1.7

Pseudo genes

n.d

n.d

Genes in internal clustersc

n.d

n.d

Genes with function prediction

3156

67.1

Genes assigned to COGs

4201

89.3

Genes with Pfam domains

3711

77.4

Genes with signal peptides

254

5.3

Genes with transmembrane helices

1219

25.8

CRISPR repeatsd

10

0.2

  1. aThe total is based on either the size of the genome in base pairs or the total number of genes in the annotated genome
  2. bIncludes tRNA, mRNA, rRNA
  3. c n.d. Not determined
  4. dIncluding confirmed and questionable