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Table 3 Genome statistics

From: Complete genome sequence of Microbulbifer sp. CCB-MM1, a halophile isolated from Matang Mangrove Forest, Malaysia

Attribute Value % of Totala
Genome size 3,864,326 100.00
DNA coding (bp) 3,487,727 90.25
DNA G + C (bp) 2,274,198 58.85
DNA scaffolds 1 -
Total genes 3406 100.00
Protein coding genes 3313 97.27
RNA genes 92 2.70
Pseudo genes 1 0.03
Genes in internal clusters - -
Genes with function prediction 2030 59.62
Genes assigned to COGs 2563 75.27
Genes with Pfam domains 2856 83.88
Genes with signal peptides 403 11.84
Genes with transmembrane helices 851 24.99
CRISPR repeats 0 0
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome