Table 3 Genome statistics
Attribute | Value | % of Totala |
|---|---|---|
Genome size | 3,864,326 | 100.00 |
DNA coding (bp) | 3,487,727 | 90.25 |
DNA GÂ +Â C (bp) | 2,274,198 | 58.85 |
DNA scaffolds | 1 | - |
Total genes | 3406 | 100.00 |
Protein coding genes | 3313 | 97.27 |
RNA genes | 92 | 2.70 |
Pseudo genes | 1 | 0.03 |
Genes in internal clusters | - | - |
Genes with function prediction | 2030 | 59.62 |
Genes assigned to COGs | 2563 | 75.27 |
Genes with Pfam domains | 2856 | 83.88 |
Genes with signal peptides | 403 | 11.84 |
Genes with transmembrane helices | 851 | 24.99 |
CRISPR repeats | 0 | 0 |