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Table 4 Number of genes associated with general COG functional categories

From: Genomics insights into production of 2-methylisoborneol and a putative cyanobactin by Planktothricoides sp. SR001

Code Value %age Description
J 189 6.33 Translation, ribosomal structure and biogenesis
A 1 0.03 RNA processing and modification
K 94 3.15 Transcription
L 52 1.71 Replication, recombination and repair
B 2 0.07 Chromatin structure and dynamics
D 32 1.07 Cell cycle control, Cell division, chromosome partitioning
V 120 4.02 Defense mechanisms
T 241 8.07 Signal transduction mechanisms
M 212 7.1 Cell wall/membrane biogenesis
N 40 1.34 Cell motility
U 32 1.07 Intracellular trafficking and secretion
O 151 5.05 Posttranslational modification, protein turnover, chaperones
C 137 4.59 Energy production and conversion
G 116 3.88 Carbohydrate transport and metabolism
E 197 6.59 Amino acid transport and metabolism
F 72 2.41 Nucleotide transport and metabolism
H 185 6.19 Coenzyme transport and metabolism
I 75 2.51 Lipid transport and metabolism
P 157 5.25 Inorganic ion transport and metabolism
Q 58 1.94 Secondary metabolites biosynthesis, transport and catabolism
R 479 16.03 General function prediction only
S 222 7.43 Function unknown
- 3236 54.39 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome COG was obtained from the JGI IMG pipeline [32]