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Table 4 Number of genes associated with general COG functional categories

From: Genomics insights into production of 2-methylisoborneol and a putative cyanobactin by Planktothricoides sp. SR001

Code

Value

%age

Description

J

189

6.33

Translation, ribosomal structure and biogenesis

A

1

0.03

RNA processing and modification

K

94

3.15

Transcription

L

52

1.71

Replication, recombination and repair

B

2

0.07

Chromatin structure and dynamics

D

32

1.07

Cell cycle control, Cell division, chromosome partitioning

V

120

4.02

Defense mechanisms

T

241

8.07

Signal transduction mechanisms

M

212

7.1

Cell wall/membrane biogenesis

N

40

1.34

Cell motility

U

32

1.07

Intracellular trafficking and secretion

O

151

5.05

Posttranslational modification, protein turnover, chaperones

C

137

4.59

Energy production and conversion

G

116

3.88

Carbohydrate transport and metabolism

E

197

6.59

Amino acid transport and metabolism

F

72

2.41

Nucleotide transport and metabolism

H

185

6.19

Coenzyme transport and metabolism

I

75

2.51

Lipid transport and metabolism

P

157

5.25

Inorganic ion transport and metabolism

Q

58

1.94

Secondary metabolites biosynthesis, transport and catabolism

R

479

16.03

General function prediction only

S

222

7.43

Function unknown

-

3236

54.39

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome COG was obtained from the JGI IMG pipeline [32]