Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,000,979 | 100.00 |
DNA coding (bp) | 2,596,072 | 86.51 |
DNA G + C (bp) | 1,494,788 | 49.81 |
DNA scaffolds | 26 | - |
Total genes | 2,715 | 100.00 |
Protein coding genes | 2,657 | 97.86 |
RNA genes | 58 | 2.14 |
Pseudo genes | NA | NA |
Genes in internal clusters | NA | NA |
Genes with function prediction | 1888 | 69.54 |
Genes assigned to COGs | 2255 | 84.87 |
Genes with Pfam domains | 2110 | 79.41 |
Genes with signal peptides | 356 | 13.40 |
Genes with transmembrane helices | 570 | 21.45 |
CRISPR repeats | 2 | 0.07 |