Table 6 DNA:DNA-hybridization (dDDH) of APEC_O2 to selected E. coli strains
From: Chromosomal features of Escherichia coli serotype O2:K2, an avian pathogenic E. coli
DDH estimate (GLM-based) | Probability that DDH > 70% | Probability that DDH > 79% | |
|---|---|---|---|
APEC_O2 versus: | |||
E. coli 1655 (NZCP005930.1) | 74.80% [71.8–77.6%] | 85.53% | 37.84% |
APEC01 (NC008563.1) | 90.60% [88.3–92.4%] | 95.98% | 66.14% |
E. coli APECO78 (NC020163.1) | 74.70% [71.6–77.5%] | 85.33% | 37.53% |
E. coli CFT073 (NC004431.1) | 91.00% [88.8–92.8%] | 96.13% | 66.89% |
E.coli_ST131_strain_EC958 (NZHG941718.1) | 86.60% [84–88.8%] | 94.48% | 59.67% |
E.coli_O83H1_strain_NRG_857C (CP001855.1) | 96.50% [95.3–97.5%] | 95.55% | 74.94% |
E. fergusonii ATCC 35469 (NC011740.1)a | 40.30% [37.8–42.8%] | 2.9% | 0.73% |
E. coli IMT5155 (NZCP005930.1) | 90.90% [88.7–92.7%] | 96.1% | 66.7% |
E. coli S88 (CU928161.2) | 89.90% [87.6–91.8%] | 95.77% | 65.12% |
E. coli SF/468 (NZCP012625.1) | 90.50% [88.2–92.3%] | 95.95% | 65.89% |
E. coli DMS 30083 (NZKK583188.1) | 90.30% [88–92.2%] | 95.89% | 65.72% |
E. coli UTI89 (NC004431.1) | 91.10% [89–92.9%] | 96.17% | 67.05% |