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Table 4 Genome statistics

From: Chromosomal features of Escherichia coli serotype O2:K2, an avian pathogenic E. coli

Attribute Value % of Total
Genome size (bp) 4,908,820 100.00
DNA coding (bp) 4,320,149 88.01
DNA G + C (bp) 2,488,281 50.69
DNA scaffold 261 -
Total genes 4938 100
Protein coding genes 4672 94.61
RNA genes 110 2.22
Pseudo genes 156 3.16
Genes in internal clusters 252 5.1
Genes with function prediction 4209 85.24
Genes assigned to COGs 4099 83.00
Genes with Pfam domains 4713 95.44
Genes with signal peptides 550 11.14
Genes with transmembrane helices 1107 22.42
CRISPR repeats 2