Table 3 Genome statistics
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 4,535,074 | 100 |
DNA coding (bp) | 4,016,676 | 88.57 |
DNA G + C (bp) | 3,283,351 | 72.40 |
DNA scaffolds | 85 | |
Total genes | 3975 | 100 |
Protein coding genes | 3918 | 98.57 |
RNA genes | 57 | 1.43 |
Pseudogenes | 0 | 0 |
Genes in internal clusters | 928 | 23.35 |
Genes with function prediction | 3036 | 76,38 |
Genes assigned to COGs | 2559 | 64,38 |
Genes with Pfam domains | 3158 | 79,45 |
Genes with signal peptides | 332 | 0,84 |
Genes with transmembrane helices | 1142 | 28,73 |
CRISPR repeats | 0 | 0 |