Table 7 Sequence similarity of genes involved in R. solanacearum virulence between the three newly sequenced strains and the reference stain GMI1000
| Â | FJAT-91 | FJAT-452 | FJAT-462 | |||
|---|---|---|---|---|---|---|
| Â | Gene | Protein | Gene | Protein | Gene | Protein |
Plant sensing and virulence regulation | ||||||
 hrpG | 99.46 | 99.59 | 99.46 | 99.59 | 99.32 | 99.19 |
 prhA | 99.54 | 99.77 | 99.75 | 100.00 | 99.62 | 100.00 |
 prhJ | 99.23 | 100.00 | 99.04 | 99.43 | 98.97 | 99.38 |
 prhR | 100.00 | 100.00 | 99.61 | 100.00 | 99.19 | 98.78 |
Non-T3SS virulence factors | ||||||
 egl | 99.05 | 99.37 | 99.12 | 99.20 | 98.94 | 99.20 |
 epsA | 99.56 | 100.00 | 99.74 | 100.00 | 99.83 | 100.00 |
 epsB | 99.63 | 99.86 | 99.58 | 99.86 | 99.58 | 99.86 |
 epsC | 99.82 | 99.74 | 99.82 | 99.74 | 99.82 | 99.74 |
 epsD | 99.68 | 100.00 | 99.68 | 100.00 | 99.68 | 100.00 |
 epsE | 99.40 | 100.00 | 99.54 | 99.77 | 99.62 | 99.77 |
 epsF | 99.75 | 99.75 | 99.68 | 100.00 | 98.35 | 98.26 |
 epsP | 99.77 | 100.00 | 99.77 | 100.00 | 99.77 | 100.00 |
 epsR | 99.86 | 100.00 | 99.86 | 100.00 | 99.86 | 100.00 |
 pehB | 99.05 | 99.43 | 99.68 | 99.04 | 99.15 | 99.15 |
 phcA | 99.62 | 99.71 | 99.62 | 99.71 | 99.71 | 99.71 |
 phcB | 86.41 | 85.84 | 86.41 | 85.84 | 99.93 | 100.00 |
 vsrA | 98.34 | 97.84 | 99.65 | 100.00 | 99.65 | 99.79 |
 vsrB | 99.89 | 100.00 | 99.57 | 100.00 | 99.40 | 99.67 |
 vsrC | 99.70 | 100.00 | 99.70 | 100.00 | 99.70 | 100.00 |
 vsrD | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 |
 xpsR | 99.78 | 99.67 | 99.78 | 100.00 | 99.67 | 99.67 |