Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 199 | 6.69 | Translation, ribosomal structure and biogenesis |
A | - | - | RNA processing and modification |
K | 284 | 9.55 | Transcription |
L | 121 | 4.07 | Replication, recombination and repair |
B | - | - | Chromatin structure and dynamics |
D | 32 | 1.08 | Cell cycle control, Cell division, chromosome partitioning |
V | 57 | 1.92 | Defense mechanisms |
T | 165 | 5.55 | Signal transduction mechanisms |
M | 120 | 4.03 | Cell wall/membrane biogenesis |
N | 63 | 2.12 | Cell motility |
U | 43 | 1.45 | Intracellular trafficking and secretion |
O | 89 | 2.99 | Posttranslational modification, protein turnover, chaperones |
C | 174 | 5.85 | Energy production and conversion |
G | 539 | 18.12 | Carbohydrate transport and metabolism |
E | 224 | 7.53 | Amino acid transport and metabolism |
F | 88 | 2.96 | Nucleotide transport and metabolism |
H | 135 | 4.54 | Coenzyme transport and metabolism |
I | 86 | 2.89 | Lipid transport and metabolism |
P | 111 | 3.73 | Inorganic ion transport and metabolism |
Q | 47 | 1.58 | Secondary metabolites biosynthesis, transport and catabolism |
R | 233 | 7.83 | General function prediction only |
S | 124 | 4.17 | Function unknown |
- | 1,499 | 36.28 | Not in COGs |