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Table 4 Number of genes associated with general COG functional categories

From: Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies

Code Value %age Description
J 0 0.00 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 1 1.34 Transcription
L 3 4.11 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 0 0.00 Cell cycle control, Cell division, chromosome partitioning
V 0 0.00 Defense mechanisms
T 0 0.00 Signal transduction mechanisms
M 1 1.34 Cell wall/membrane biogenesis
N 0 0.00 Cell motility
U 0 0.00 Intracellular trafficking and secretion
O 0 0.00 Posttranslational modification, protein turnover, chaperones
C 0 0.00 Energy production and conversion
G 0 0.00 Carbohydrate transport and metabolism
E 0 0.00 Amino acid transport and metabolism
F 0 0.00 Nucleotide transport and metabolism
H 0 0.00 Coenzyme transport and metabolism
I 0 0.00 Lipid transport and metabolism
P 0 0.00 Inorganic ion transport and metabolism
Q 0 0.00 Secondary metabolites biosynthesis, transport and catabolism
R 1 1.34 General function prediction only
S 1 1.34 Function unknown
- 66 90.41 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome