Table 5 Number of genes associated with the general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 227 | 6.27 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 237 | 6.55 | Transcription |
L | 129 | 3.56 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 39 | 1.08 | Cell cycle control, Cell division, chromosome partitioning |
V | 83 | 2.29 | Defense mechanisms |
T | 243 | 6.71 | Signal transduction mechanisms |
M | 216 | 5.97 | Cell wall/membrane biogenesis |
N | 158 | 4.37 | Cell motility |
U | 78 | 2.16 | Intracellular trafficking and secretion |
O | 155 | 4.28 | Posttranslational modification, protein turnover, chaperones |
C | 251 | 6.94 | Energy production and conversion |
G | 169 | 4.67 | Carbohydrate transport and metabolism |
E | 285 | 7.88 | Amino acid transport and metabolism |
F | 85 | 2.35 | Nucleotide transport and metabolism |
H | 171 | 4.73 | Coenzyme transport and metabolism |
I | 172 | 4.75 | Lipid transport and metabolism |
P | 241 | 6.66 | Inorganic ion transport and metabolism |
Q | 91 | 2.51 | Secondary metabolites biosynthesis, transport and catabolism |
R | 302 | 8.34 | General function prediction only |
S | 230 | 6.36 | Function unknown |
- | 1217 | 27.58 | Not in COGs |