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Table 5 Number of genes associated with the general COG functional categories

From: Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site

Code Value % of totala Description
J 227 6.27 Translation, ribosomal structure and biogenesis
A 1 0.03 RNA processing and modification
K 237 6.55 Transcription
L 129 3.56 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 39 1.08 Cell cycle control, Cell division, chromosome partitioning
V 83 2.29 Defense mechanisms
T 243 6.71 Signal transduction mechanisms
M 216 5.97 Cell wall/membrane biogenesis
N 158 4.37 Cell motility
U 78 2.16 Intracellular trafficking and secretion
O 155 4.28 Posttranslational modification, protein turnover, chaperones
C 251 6.94 Energy production and conversion
G 169 4.67 Carbohydrate transport and metabolism
E 285 7.88 Amino acid transport and metabolism
F 85 2.35 Nucleotide transport and metabolism
H 171 4.73 Coenzyme transport and metabolism
I 172 4.75 Lipid transport and metabolism
P 241 6.66 Inorganic ion transport and metabolism
Q 91 2.51 Secondary metabolites biosynthesis, transport and catabolism
R 302 8.34 General function prediction only
S 230 6.36 Function unknown
- 1217 27.58 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the annotated genome