Skip to main content

Table 5 Number of genes associated with general COG functional categories

From: Genome features of moderately halophilic polyhydroxyalkanoate-producing Yangia sp. CCB-MM3

Code Value % age Description
J 189 3.76 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 350 6.96 Transcription
L 190 3.78 Replication, recombination and repair
B 3 0.06 Chromatin structure and dynamics
D 33 0.66 Cell cycle control, cell division, chromosome partitioning
V 45 0.90 Defense mechanisms
T 153 3.04 Signal transduction mechanisms
M 252 5.01 Cell wall/membrane biogenesis
N 49 0.97 Cell motility
U 55 1.09 Intracellular trafficking and secretion
O 139 2.77 Posttranslational modification, protein turnover, chaperones
C 276 5.49 Energy production and conversion
G 374 7.44 Carbohydrate transport and metabolism
E 615 12.23 Amino acid transport and metabolism
F 107 2.13 Nucleotide transport and metabolism
H 163 3.24 Coenzyme transport and metabolism
I 169 3.36 Lipid transport and metabolism
P 288 5.73 Inorganic ion transport and metabolism
Q 176 3.50 Secondary metabolites biosynthesis, transport and catabolism
R 582 11.58 General function prediction only
S 348 6.92 Function unknown
1082 21.52 Not in COGs