Table 4 Genome statistics
From: Genome features of moderately halophilic polyhydroxyalkanoate-producing Yangia sp. CCB-MM3
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 5,522,061 | 100.00 |
DNA coding (bp) | 4,744,053 | 85.91 |
DNA G + C (bp) | 3,588,235 | 64.98 |
DNA scaffolds | 7 | 100.00 |
Total genes | 5096 | 100.00 |
Protein coding genes | 5027 | 98.65 |
RNA genes | 69 | 1.35 |
Pseudo genes | 61 | 1.20 |
Genes in internal clusters | NA | NA |
Genes with function prediction | 3774 | 74.06 |
Genes assigned to COGs | 3945 | 77.41 |
Genes with Pfam domains | 4244 | 83.28 |
Genes with signal peptides | 461 | 9.05 |
Genes with transmembrane helices | 1123 | 22.04 |
CRISPR repeats | 2 | 0.04 |