Table 5 Number of genes associated with general COG functional categories
Code | Value | Percenta | Description |
|---|---|---|---|
J | 179 | 8.42 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 108 | 5.08 | Transcription |
L | 97 | 4.56 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 26 | 1.22 | Cell cycle control, Cell division, chromosome partitioning |
V | 34 | 1.60 | Defense mechanisms |
T | 58 | 2.72 | Signal transduction mechanisms |
M | 83 | 3.90 | Cell wall/membrane biogenesis |
N | 11 | 0.52 | Cell motility |
U | 13 | 0.61 | Intracellular trafficking and secretion |
O | 52 | 0.02 | Posttranslational modification, protein turnover, chaperones |
C | 72 | 3.39 | Energy production and conversion |
G | 91 | 4.28 | Carbohydrate transport and metabolism |
E | 148 | 6.96 | Amino acid transport and metabolism |
F | 96 | 4.51 | Nucleotide transport and metabolism |
H | 95 | 4.47 | Coenzyme transport and metabolism |
I | 63 | 2.96 | Lipid transport and metabolism |
P | 81 | 3.80 | Inorganic ion transport and metabolism |
Q | 21 | 0.99 | Secondary metabolites biosynthesis, transport and catabolism |
R | 134 | 6.30 | General function prediction only |
S | 6.30 | 3.76 | Function unknown |
- | 766 | 36.01 | Not in COGs |