Table 4 Genome statistics
Attribute | Value | Percent |
|---|---|---|
Genome size (bp) | 2,330,492 | 100.00 |
DNA coding (bp) | 2,028,095 | 87.02 |
DNA G + C (bp) | 1,179,376 | 50.56 |
DNA scaffolds | 2 | 100.00 |
Total genes | 2,328 | 100.00 |
Protein coding genes | 2127 | 91.37 |
RNA genes | 73 | 3.14 |
Pseudo genes | 128 | 0.05 |
Genes in internal clusters | 481 | 20.66 |
Genes with function prediction | 1824 | 78.35 |
Genes assigned to COGs | 1563 | 67.14 |
Genes with Pfam domains | 1898 | 81.53 |
Genes with signal peptides | 37 | 1.59 |
Genes with transmembrane helices | 507 | 21.78 |
CRISPR repeats | 3 | 0.13 |