Table 4 Number of genes associated with general COG functional categories
From: The complete genome sequence of the yogurt isolate Streptococcus thermophilus ACA-DC 2
Code | Value | %age | Description |
|---|---|---|---|
J | 146 | 9.38 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 89 | 5.72 | Transcription |
L | 136 | 8.74 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 16 | 1.03 | Cell cycle control, Cell division, chromosome partitioning |
V | 39 | 2.51 | Defense mechanisms |
T | 43 | 2.76 | Signal transduction mechanisms |
M | 80 | 5.14 | Cell wall/membrane biogenesis |
N | 3 | 0.19 | Cell motility |
U | 20 | 1.29 | Intracellular trafficking and secretion |
O | 55 | 3.53 | Posttranslational modification, protein turnover, chaperones |
C | 40 | 2.57 | Energy production and conversion |
G | 66 | 4.24 | Carbohydrate transport and metabolism |
E | 160 | 10.28 | Amino acid transport and metabolism |
F | 67 | 4.31 | Nucleotide transport and metabolism |
H | 49 | 3.15 | Coenzyme transport and metabolism |
I | 33 | 2.12 | Lipid transport and metabolism |
P | 67 | 4.31 | Inorganic ion transport and metabolism |
Q | 13 | 0.84 | Secondary metabolites biosynthesis, transport and catabolism |
R | 63 | 4.05 | General function prediction only |
S | 215 | 13.82 | Function unknown |
- | 229 | 14.72 | Not in COGs |