Table 3 Genome statistics
From: The complete genome sequence of the yogurt isolate Streptococcus thermophilus ACA-DC 2
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 1,731,838 | 100.00 |
DNA coding (bp) | 1,356,670 | 78.34 |
DNA G + C (bp) | 679,104 | 39.21 |
DNA scaffolds | 1 | 100.00 |
Total genes | 1,850 | 100.00 |
Protein coding genes | 1,556 | 84.11 |
RNA genes | 70 | 3.78 |
Pseudo genes | 224 | 12.11 |
Genes in internal clusters | NA | NA |
Genes with function prediction | 1,182 | 63.89 |
Genes assigned to COGs | 1,327 | 71.73 |
Genes with Pfam domains | 1,318 | 71.24 |
Genes with signal peptides | 127 | 6.86 |
Genes with transmembrane helices | 339 | 18.32 |
CRISPR repeats | 2 | Â |