Table 3 Genome Statistics
Attribute | Value | % of total a |
|---|---|---|
Genome size (bp) | 5,585,780 | 100.00 |
DNA coding (bp) | 4,761,339 | 85.24 |
DNA G + C (bp) | 3,960,974 | 70.91 |
DNA scaffolds | 1 | - |
Total genes | 5,104 | - |
Protein-coding genes | 4,905 | 98.03 |
RNA genes | 50 | 0.98 |
Pseudo genes | 149 | 2.98 |
Genes in internal clusters | 1763 | 34.54 |
Genes with function prediction | 2,504 | 48.86 |
Genes assigned to COGs | 2,156 | 42.07 |
Genes with Pfam domains | 1,734 | 33.97 |
Genes with signal peptides | 456 | 8.69 |
Genes with trandmembrane helices | 1230 | 23.43 |
CPISPR repeats | 0 | - |