Table 4 Genome statistics
From: Complete genome sequence of Thermus brockianus GE-1 reveals key enzymes of xylan/xylose metabolism
Attribute | Value | % of Totala |
|---|---|---|
Genome size (bp) | 2,388,273 | 100.0 |
DNA coding (bp) | 2,217,408 | 92.9 |
DNA G + C (bp) | 1,597,811 | 67.0 |
DNA scaffolds | 3 | 100.0 |
Total genes | 2,511 | 100.0 |
Protein coding genes | 2,458 | 97.9 |
RNA genes | 53 | 2.1 |
Pseudo genesb | 66 | 2.6 |
Genes in internal clusters | - | - |
Genes with function prediction | 1,834 | 73.0 |
Genes assigned to COGs | 1,948 | 77.6 |
Genes with Pfam domains | 1,736 | 69.1 |
Genes with signal peptides | 112 | 4.5 |
Genes with transmembrane helices | 561 | 22.3 |
CRISPR repeats | 8 | 0.3 |