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Table 4 Genomes identified from PacBio assemblies. PacBio read coverage calculated by mapping with BLASR

From: Towards long-read metagenomics: complete assembly of three novel genomes from bacteria dependent on a diazotrophic cyanobacterium in a freshwater lake co-culture

Genome

Assembly Length (bp)

No. contigs

PB read coverage

Completeness estimate

Contamination estimate

Hyphomonadaceae UKL13-1

3,501,508

1

94x

-

-

Betaproteobacterium UKL13-2

3,387,087

1

143x

-

-

Bacteroidetes bacterium UKL13-3

3,236,529

1

112x

-

-

Aphanizomenon flos-aquae

4,250,721

67

40x

96.67%

0.22%

Unknown Flavobacterium

2,347,065

96

22x

62.67%

0.25%

Unknown Caulobacterales bacterium

487,875

53

6x

17.15%

0.00%

  1. Completeness and contamination estimates for incomplete genomes are from CheckM