Draft genome sequence of Lactobacillus plantarum strains E2C2 and E2C5 isolated from human stool culture

Suryavanshi, Mangesh V.; Paul, Dhiraj; Doijad, Swapnil P.; Bhute, Shrikant S.; Hingamire, Tejashri B.; Gune, Rahul P.; Shouche, Yogesh S.

doi:10.1186/s40793-017-0222-x

Environmental Microbiome

Table 1 Classification and general features of L. plantarum E2C2 and L. plantarum E2C5

From: Draft genome sequence of Lactobacillus plantarum strains E2C2 and E2C5 isolated from human stool culture

MIGS ID	Property	L. plantarum E2C2	L. plantarum E2C5	Evidence code^a
	Domain	Bacteria	Bacteria	TAS [41]
	Phylum	Firmicutes	Firmicutes	TAS [42, 43]
	Class	Bacilli	Bacilli	TAS [44]
	Order	Lactobacillales	Lactobacillales	TAS [45]
	Family	Lactobacillaceae	Lactobacillaceae	TAS [46]
	Genus	Lactobacillus	Lactobacillus	TAS [43, 47–50]
	Species	Lactobacillus plantarum	Lactobacillus plantarum	TAS [43, 47, 51]
	Strain	E2C2	E2C25
	Gram stain	Positive	Positive	TAS [43]
	Cell shape	Rod	Rod	IDA
	Motility	non-motile	non-motile	TAS [43]
	Sporulation	spore forming	spore forming	IDA
	Temperature range	25 °C −39 °C	25 °C −39 °C	NAS
	Optimum temperature	30 °C	30 °C	TAS [43]
	pH range; Optimum	3.5–6.5; 5	3.5–6.5; 5	TAS [43]
	Carbon source	Xylose, Maltose, Fructose, Dextrose, Galactose, Raffinose, Melibiose, Trehalose, Sucrose, L-Arabinose, Mannose, Inulin, Na-gluconate, Salicin, Sorbitol, Mannitol, Cellobiose, Melezitose, ONPG, Esculin, Citrate, Malonate	Xylose, Maltose, Fructose, Dextrose, Galactose, Raffinose, Melibiose, Trehalose, Sucrose, L-Arabinose, Mannose, Inulin, Na-gluconate, Salicin, Sorbitol, Mannitol, Cellobiose, Melezitose, ONPG, Esculin, Citrate, Malonate	IDA
MIGS-6	Habitat	Human stool	Human stool	IDA
MIGS-6.3	Salinity tolerance	5- 8%	5- 8%	TAS [45]
MIGS-22	Oxygen requirement	Facultatively anaerobic	Facultatively anaerobic	TAS [43]
MIGS-15	Biotic relationship	Free-living	Free-living	TAS [45]
MIGS-14	Pathogenicity	non-pathogen	non-pathogen	NAS
MIGS-4	Geographic location	India/Asia	India/Asia	IDA
MIGS-5	Sample collection	November 2015	November 2015	IDA
MIGS-4.1	Latitude	18.5204° N	18.5204° N	IDA
MIGS-4.2	Longitude	73.8567° E	73.8567° E	IDA
MIGS-4.4	Altitude	562 m a.s.l.	562 m a.s.l.	IDA

^aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [52]

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ISSN: 2524-6372

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