Skip to main content

Table 5 Number of protein coding gene of Flammeovirga sp. SJP92 associated with COG functional categories

From: Genome sequence of a high agarase-producing strain Flammeovirga sp. SJP92

Code

value

% age

Description

J

178

2.83

Translation, ribosomal structure and biogenesis

A

0

0

RNA processing and modification

K

382

6.07

Transcription

L

199

3.16

Replication, recombination and repair

B

2

0.03

Chromatin structure and dynamics

D

47

0.75

Cell cycle control, cell division, chromosome partitioning

V

90

1.43

Defense mechanisms

T

401

6.37

Signal transduction mechanisms

M

347

5.51

Cell wall/membrane/envelope biogenesis

N

34

0.54

Cell motility

U

80

1.27

Intracellular trafficking, secretion, and vesicular transport

O

158

2.51

Posttranslational modification, protein turnover, chaperones

C

215

3.42

Energy production and conversion

G

306

4.8

Carbohydrate transport and metabolism

E

269

4.23

Amino acid transport and metabolism

F

86

1.37

Nucleotide transport and metabolism

H

193

3.06

Coenzyme transport and metabolism

I

147

2.34

Lipid transport and metabolism

P

318

5.05

Inorganic ion transport and metabolism

Q

93

1.48

Secondary metabolites biosynthesis, transport and catabolism

R

561

8.92

General function prediction only

S

350

5.56

Function unknown

-

2539

40.35

Not in COGs