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Table 4 Genome Statistics for Flammeovirga sp. SJP92

From: Genome sequence of a high agarase-producing strain Flammeovirga sp. SJP92

Attribute

Value

% of Totala

Genome size (bp)

8,534,834

100.0

DNA coding (bp)

7,309,656

85.64

DNA G + C (bp)

2,970,122

34.80

DNA scaffolds

44

100.00

Total genes

6519

100.00

Protein-coding genes

6291

96.5

RNA genes

99

1.52

Pseudo genes

127

1.95

Genes in internal clusters

NA

NA

Genes with function prediction

4240

65.04

Genes assigned to COGs

3752

57.55

Genes assigned Pfam domains

3964

60.81

Genes with signal peptides

1658

25.43

Genes with transmembrane helices

1510

23.16

CRISPR repeats

1

0.01

  1. aThe total is based on either the size of the genome in base pairs or on the total number of protein coding genes in the annotated genome
  2. NA not available