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Table 4 Number of genes associated with general COG functional categories

From: Complete genome sequence of Lutibacter profundi LP1T isolated from an Arctic deep-sea hydrothermal vent system

Code Value Percent agea Description
J 131 5,2 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 88 3,5 Transcription
L 105 4,1 Replication, recombination and repair
B 0 0 Chromatin structure and dynamics
D 17 0,7 Cell cycle control, cell division, chromosome partitioning
V 35 1,4 Defence mechanisms
T 67 2,6 Signal transduction mechanisms
M 160 6,3 Cell wall/membrane/envelope biogenesis
N 3 0,1 Cell motility
U 21 0,8 Intracellular trafficking, secretion, and vesicular transport
O 92 3,6 Posttranslational modification, protein turnover, chaperones
C 161 6,3 Energy production and conversion
G 55 2,2 Carbohydrate transport and metabolism
E 179 7,1 Amino acid transport and metabolism
F 63 2,5 Nucleotide transport and metabolism
H 69 2,7 Coenzyme transport and metabolism
I 57 2,2 Lipid transport and metabolism
P 107 4,2 Inorganic ion transport and metabolism
Q 12 0,5 Secondary metabolites biosynthesis, transport and catabolism
R 0 0 General function prediction only
S 1025 40,4 Function unknown
- 94 3,7 Not in COGs
  1. athe total is based on the number of protein coding genes in the annotated genome