Table 3 Genome statistics
Attribute | Value fSE1C | % of Total fSE1C | Value fSE4S | % of Total fSE4S |
|---|---|---|---|---|
Genome size (bp) | 41,720 | 100.00 | 41,768 | 100.00 |
DNA coding (bp) | 36,813 | 88.24 | 37,032 | 88.66 |
DNA G + C (bp) | 20,747 | 49.73 | 20,926 | 49.78 |
DNA scaffolds | 1 | 100.00 | 1 | 100.00 |
Total genes | 53 | 88.24 | 52 | 88.66 |
Protein coding genes | 53 | 88.24 | 52 | 88.66 |
RNA genes | 0 | 0.00 | 0 | 0.00 |
Pseudo genes | 0 | 0.00 | 0 | 0.00 |
Genes in internal clusters | 0 | 0.00 | 0 | 0.00 |
Genes with function prediction | 22 | 36.62 | 18 | 30.69 |
Genes assigned to COGs | 10 | 19.98 | 26 | 20.46 |
Genes with Pfam domains | 31 | 36.36 | 33 | 52.26 |
Genes with signal peptides | 0 | 0.00 | 0 | 0.00 |
Genes with transmembrane helices | 0 | 0.00 | 0 | 0.00 |
CRISPR direct repeats | 2 | 0,24 | 2 | 0,24 |