Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,373,124 | 100.00 |
DNA coding (bp) | 3,961,563 | 90.60 |
DNA G + C (bp) | 3,065,123 | 70.09 |
DNA scaffolds | 1 | – |
Total genes | 4005 | 100.00 |
Protein coding genes | 3928 | 98.08 |
RNA genes | 77 | 1.92 |
Pseudo genes | 31 | 0.77 |
Genes in internal clusters | 1152 | 28.76 |
Genes with function prediction | 2979 | 74.38 |
Genes assigned to COGs | 2771 | 70.54 |
Genes with Pfam domains | 2476 | 61.82 |
Genes with signal peptides | 326 | 8.14 |
Genes with transmembrane helices | 1191 | 29.74 |
CRISPR | 1 | 0.02 |