Table 4 Number of genes associated with general COG functional categories
Code | Value | % | Description |
|---|---|---|---|
J | 198 | 5.07 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 392 | 10.04 | Transcription |
L | 122 | 3.12 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 25 | 0.64 | Cell cycle control, Cell division, chromosome partitioning |
V | 94 | 2.41 | Defence mechanisms |
T | 137 | 3.51 | Signal transduction mechanisms |
M | 144 | 3.69 | Cell wall/membrane biogenesis |
N | 10 | 0.26 | Cell motility |
U | 23 | 0.59 | Intracellular trafficking and secretion |
O | 121 | 3.1 | Posttranslational modification, protein turnover, chaperones |
C | 210 | 5.38 | Energy production and conversion |
G | 648 | 12.31 | Carbohydrate transport and metabolism |
E | 459 | 11.75 | Amino acid transport and metabolism |
F | 91 | 2.33 | Nucleotide transport and metabolism |
H | 219 | 5.61 | Coenzyme transport and metabolism |
I | 255 | 6.53 | Lipid transport and metabolism |
P | 244 | 6.25 | Inorganic ion transport and metabolism |
Q | 154 | 3.94 | Secondary metabolites biosynthesis, transport and catabolism |
R | 443 | 11.34 | General function prediction only |
S | 158 | 44.05 | Function unknown |
- | 1848 | 35.75 | Not in COGs |