Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 2 | 0.03 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.04 | RNA processing and modification |
K | 281 | 4.21 | Transcription |
L | 32 | 0.48 | Replication, recombination and repair |
B | 545 | 8.16 | Chromatin structure and dynamics |
D | 81 | 1.21 | Cell cycle control, Cell division, chromosome partitioning |
V | 284 | 4.25 | Defense mechanisms |
T | 162 | 2.43 | Signal transduction mechanisms |
M | 211 | 3.16 | Cell wall/membrane biogenesis |
N | 165 | 2.47 | Cell motility |
U | 442 | 6.62 | Intracellular trafficking and secretion |
O | 153 | 2.29 | Posttranslational modification, protein turnover, chaperones |
C | 256 | 3.83 | Energy production and conversion |
G | 158 | 2.37 | Carbohydrate transport and metabolism |
E | 174 | 2.61 | Amino acid transport and metabolism |
F | 239 | 3.58 | Nucleotide transport and metabolism |
H | 112 | 1.68 | Coenzyme transport and metabolism |
I | 468 | 7.01 | Lipid transport and metabolism |
P | 344 | 5.15 | Inorganic ion transport and metabolism |
Q | 263 | 3.94 | Secondary metabolites biosynthesis, transport and catabolism |
R | 50 | 0.75 | General function prediction only |
S | 56 | 0.84 | Function unknown |
– | 3201 | 47.93 | Not in COGs |