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Table 3 Genome statistics

From: Complete genome sequence and whole-genome phylogeny of Kosmotoga pacifica type strain SLHLJ1T from an East Pacific hydrothermal sediment

Attribute

Value

% of Total

Genome size (bp)

2,169,170

100.0

DNA coding (bp)

1,814,445

83.65

DNA G + C (bp)

922,242

42.52

DNA scaffolds

1

 

Total genes

2074

100.00

Protein coding genes

1897

91.47

RNA genes

177

8.53

Pseudo genes

124

5.98

Genes in internal clusters

ND

ND

Genes with function prediction

1737

83.75

Genes assigned to COGs

1124

54.19

Genes assigned Pfam domains

1770

85.34

Genes with signal peptides

37

1.78

Genes with transmembrane helices

538

25.94

CRISPR repeats

0

0

  1. ND not determined