Table 4 Number of genes associated with the general COG functional categories
Code | value | % age | Description |
|---|---|---|---|
J | 206 | 5.33 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 439 | 11.36 | Transcription |
L | 109 | 2.82 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 33 | 0.85 | Cell cycle control, cell division, chromosome partitioning |
V | 150 | 3.88 | Defense mechanisms |
T | 184 | 4.76 | Signal transduction mechanisms |
M | 159 | 4.11 | Cell wall/membrane biogenesis |
N | 7 | 0.18 | Cell motility |
U | 29 | 0.75 | Intracellular trafficking and secretion, and vesicular transport |
O | 136 | 3.52 | Posttranslational modification, protein turnover, chaperones |
Z | Cytoskeleton | ||
W | 4 | 0.1 | Extracellular structures |
C | 213 | 5.51 | Energy production and conversion |
G | 348 | 9 | Carbohydrate transport and metabolism |
E | 334 | 8.64 | Amino acid transport and metabolism |
F | 94 | 2.43 | Nucleotide transport and metabolism |
H | 255 | 6.6 | Coenzyme transport and metabolism |
I | 181 | 4.68 | Lipid transport and metabolism |
P | 204 | 5.28 | Inorganic ion transport and metabolism |
Q | 190 | 4.91 | Secondary metabolites biosynthesis, transport and catabolism |
R | 450 | 11.64 | General function prediction only |
S | 135 | 3.49 | Function unknown |
X | 4 | 0.1 | Mobilome: prophages, transposons |
- | 2102 | 38.7 | Not in COGs |