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Table 3 Genome Statistics

From: Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177T isolated from a marine sponge

Attribute Value % of totala
Genome size (bp) 6,306,386 100.00
DNA coding (bp) 5,516,402 87.47
DNA G+C (bp) 4,293,157 68.08
DNA scaffolds 1 100.00
Total genes 5425 100.00
Protein-coding genes 5346 98.54
RNA genes 73 1.34
Pseudo genes 6 0.11
Genes with internal clusters 753 13.86
Genes with function prediction 4068 74.90
Genes assigned to COGs 3329 61.30
Genes with Pfam domains 4327 79.67
Genes with signal peptides 381 7.02
Genes with transmembrane helices 1271 23.40
CRISPR repeats 15  
  1. aThe total is based on either the size of the genome in base pairs or the total number of total genes in the annotated genome