Table 4 Number of genes associated with general COG functional categories
Code | Value | % of Totala | Description |
|---|---|---|---|
J | 5 | 2.55 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.51 | RNA processing and modification |
K | 3 | 1.53 | Transcription |
L | 17 | 8.67 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 2 | 1.02 | Cell cycle control, Cell division, chromosome partitioning |
V | 0 | 0.00 | Defense mechanisms |
T | 6 | 3.06 | Signal transduction mechanisms |
M | 0 | 0.00 | Cell wall/membrane biogenesis |
N | 0 | 0.00 | Cell motility |
U | 0 | 0.00 | Intracellular trafficking and secretion |
O | 6 | 3.06 | Posttranslational modification, protein turnover, chaperones |
C | 0 | 0.00 | Energy production and conversion |
G | 0 | 0.00 | Carbohydrate transport and metabolism |
E | 12 | 6.12 | Amino acid transport and metabolism |
F | 11 | 5.61 | Nucleotide transport and metabolism |
H | 5 | 2.55 | Coenzyme transport and metabolism |
I | 0 | 0.00 | Lipid transport and metabolism |
P | 0 | 0.00 | Inorganic ion transport and metabolism |
Q | 0 | 0.00 | Secondary metabolites biosynthesis, transport and catabolism |
R | 20 | 10.20 | General function prediction only |
S | 60 | 30.61 | Function unknown |
- | 48 | 24.48 | Not in COGs |